Payroll software for businesses in Mombasa
Mombasa is Kenya's main port city, with large employers in shipping, logistics, tourism and hospitality. Payroll Africa lets employers in Mombasa pay staff in KES, with Kenya tax and contributions calculated automatically and payslips sent straight to employees' phones.
What you get
Kenya tax worked out for you
Income tax, NSSF, SHIF health insurance, Affordable Housing Levy calculated for every employee on the 2026 rates.
Payslips by WhatsApp and email
Employees get their payslip on their phone the moment you approve the run.
Clock-in by WhatsApp
Staff clock in and out from their phone; worked hours flow straight into payroll.
Leave and employee records
Leave requests, balances and employee files in one place, with employee self-service.
Bank payment files
Export one payment file for the bank, with a separate list for staff paid in cash.
Reports for every pay run
Payroll summaries, deduction reports and records for the authorities, ready to download.
Work out a salary in Mombasa
See take-home pay and employer cost for a monthly salary in KES.
Take-home pay
KES 45,311.67
PAYE
KES 8,538.33
14.2% of gross
Cost to employer
KES 64,500.00
| Item | Employee | Employer |
|---|---|---|
| Gross salary | KES 60,000.00 | — |
| NSSF(deducted before tax) | − KES 3,600.00 | KES 3,600.00 |
| SHIF health insurance(deducted before tax) | − KES 1,650.00 | — |
| Affordable Housing Levy(deducted before tax) | − KES 900.00 | KES 900.00 |
| PAYE | − KES 8,538.33 | — |
| Net pay | KES 45,311.67 | KES 64,500.00 |
Monthly estimate for a resident employee with no other reliefs, benefits or deductions, using the 2026 tax year configured in Payroll Africa. Confirm with the Kenya Revenue Authority (KRA) for your situation.
Run your Mombasa payroll in minutes
One price per employee, every feature included. Try it free for 30 days, no card needed.
- No card required
- 30-day free trial
- Free migration from Sage, SimplePay, PaySpace or Excel
- Cancel anytime
Run Payroll Africa alongside your current system until you're happy to switch.